BOSC 2000

Conference Schedule & Abstracts

August 17, 2000:

Time
Event/Talk
Speaker
1:00-2:00 Registration and poster setup
2:00-2:20 Intro/Bioperl Ewan Birney
EBI
2:30-2:50 BioJava Matt Pocock
Sanger Centre
3:00-3:20 BioXML Brad Marshall
Berkeley
3:30-4:00 Coffee break
4:00-4:20 BioPython Jeff Chang
Stanford
4:30-4:50 BioCorba Jason Staitich
Duke
5:00-5:20 Ensembl Michele Clamp
Sanger Centre
6:00 Dinner @ UCSD
8:00-10:00 Ad hoc meetings & BOF gatherings

August 18, 2000:

Time
Event/Talk
Speaker
9:00-10:00 Keynote Tim O'Reilly
O'Reilly & Associates
10:00-10:30 Coffee break
10:30-10:50 Distributing bioinformatics applications with Piper J.W. Bizarro
University of Massachusetts Lowell
11:00-11:20 Exploiting emerging open I/O protocols for high-throughput BioAnalysis Lawrence Lau
University of Queensland
11:30-11:50 An introduction to Genome Annotation Markup Elements (GAME) XML Suzanna Lewis
Berkeley Drosophila Genome Project
12:00-2:00 Lunch and poster session
2:00-2:20 A distributed annotation system client Robin Dowell
Washington University, St. Louis
2:30-2:50 Telegraph: A free library for probabilistic sequence analysis Ian Holmes
Berkeley Drosophila Genome Project
3:00-3:30 Coffee break
3:30-3:50 E-CELL: Simulation environment for whole cell simulation Kouichi Takahashi
Keio University
4:00-4:20 FAKtory: An Open Source DNA fragment assembly system Nirav Merchant
University of Arizona, Tucson
4:30-5:15 Keynote Lincoln Stein
Cold Spring Harbor Labs
5:30 Discussion of the legal implications of open source.