Call for applications for OBF Event Fellowship, Round 2 of 2020

We are glad to announce that the call for applications for the OBF Event Fellowship is now open. The deadline for this round is 1 October 2020. Applications should be submitted via this Google Form.

Renaming from “OBF Travel Fellowship” to “OBF Event Fellowship”

One of the goals of the OBF fellowship is to increase the participation of members from traditionally underrepresented groups at events or communities that promote Open Source software development and/or open science practices in the biological sciences. Since so many scientific meetings have been or are now run online, and we wish to explicitly support remote participation for this year, we are renaming ‘OBF Travel Fellowship’ to ‘OBF Event Fellowship’.

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OBF Board elections, December 2019

During the public OBF Board Meeting held on December 17, 2019, elections were held for five Board members whose terms were about to expire. All five stood for re-election to the Board, though with some changes of officers:

  • Hilmar Lapp: stepped down after 8 years as President of the Board; elected to At-Large seat.
  • Peter Cock: elected as President of the Board.
  • Heather Wiencko: elected as Treasurer, replacing previous Treasurer Peter Cock.
  • Chris Fields: re-elected as Secretary.
  • Nomi Harris: re-elected as At-Large Board member.

In accordance with the OBF Bylaws, the newly elected Board members and officers will serve a three-year term.

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OBF Travel Fellowship: August 2019 awards

A record number of people applied for the latest round of the OBF Travel Fellowship, which closed on August 15, 2019. Out of this great set of applicants, we offered travel awards to three who epitomize the goal of the awards: to promote diversity in the world of open source bioinformatics / open science.

The awardees are Arunav Konwar, Fernanda Troyner and Nicolás Palopoli.

Arunav has contributed to open source projects including Deep Learning Indaba (an African Machine Learning community), Wikimedia, and Metafluidics. He will give a talk and lead a workshop at the Global Community Bio Summit 3.0, which aims to democratize biotechnology by building an inclusive global network of people in the life sciences.

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Malvika Sharan elected to OBF Board

Photo of Malvika Sharan At the OBF’s July 2019 public Board meeting (held at BOSC 2019), Malvika Sharan was unanimously elected as a new at-large Board member. Malvika, who earned a PhD in bioinformatics at the University of Würzburg, is a community outreach coordinator at the European Molecular Biology Laboratory (EMBL), Heidelberg. She is passionate about promoting the inclusion of historically underrepresented groups in bioinformatics and STEM in general. Malvika recently won a fellowship from the Software Sustainability Institute to support her research into identifying and developing effective training strategies in low-income research environments (limited resources, lack of funding, etc.). She was also a recipient of an OBF Travel Fellowship that helped defray her cost of attending BOSC.

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OBF Public Board Meeting (July 2019)

On July 25, 2019, the OBF held a public Board meeting in Basel, Switzerland. Organized as a Birds of a Feather session at BOSC 2019, the meeting was open to all attendees at ISMB. All but one of the current Board members were present (Secretary Chris Fields called in), as well as a number of ISMB/BOSC attendees. At the meeting, Malvika Sharan was elected as a new Board member. Other topics of discussion included the need for a Code of Conduct that applies to member projects as well as covering the yearly BOSC meeting; the policy for accepting new member projects; revisiting the OBF’s mission statement; and considering whether the OBF should issue position statements. The meeting minutes are here. There will be another public Board meeting near the end of 2019 to vote on Board members whose terms are ending.

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Welcome to our new board members!

As mentioned in our previous blog post, last Friday the OBF had a board of directors meeting. One of the notable meeting items this time was to elect more board members to help be involved with the community. We’re pleased to announce that both candidates, Bastian Greshake Tzovaras and Yo Yehudi, were unanimously voted in by the other board members!Logically, one of their first moves as newly minted members was to draft this blog post! Some of the their possible ideas for the future include:

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OBF Public Board Meeting to take place March 16, 2018 at 15:00 UTC

The OBF Board of Directors holds a public meeting about once a year, in accordance with our bylaws. The next such meeting will take place on March 16, 2018, at 15:00 UTC (11am EDT / 8am PDT / 16:00 CET). The meeting agenda can be found at /wiki/Minutes:2018_Mar_ConfCall.

At this public Board meeting, we will consider two new candidates running for Board seats: Bastian Greshake Tzovaras and Yo Yehudi. Both are known for their promotional and organizational involvement in open science, open data and open source bioinformatics.

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OBF visioning 2017

TL;DR: The OBF isn’t doing enough in public policy and advocacy around Open Science, and we are looking to recruit a new board member who is interested in this role. Is that you? If yes, then contact us.


At our October meeting, the OBF board took some time to think broadly about the OBF, current and future. We tried to answer the questions: What do we say we do? What do we actually do? What more do we wish we could do? We re-read our mission statement and list of public activities from the OBF main page, listed the current efforts of the board members and affiliates, and assessed how our actual work aligned with the stated goals of the organization. This was motivated by having board members who are new-ish to the OBF, as well as upcoming board elections.

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Mailing list outage, and public board meeting update

This time of year we’d normally be having a public board meeting as part of our commitment to communication with our member projects and the wider OBF community. As per our bylaws we notify the community at least 10 days in advance, and we’d also handle election of new board members and leadership changes where appropriate. For a couple of reasons, we’re going to postpone that until early 2018.

Our mailing list server (which hosts many of our member project lists) has been overwhelmed in the past few days, leading to delayed or blocked communication not just to our members but for our member projects who rely on it. We’re looking into options for solving this problem, which might include migrating to a hosted solution.

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OBF Public Board of Directors Meeting

The OBF has at least one public board meeting per year, in part to vote on important business issues, and in part to publicly discuss items relevant to the OBF community.  The latest public OBF Board of Director’s meeting took place October 4, 2016. It was attended by Board members Hilmar Lapp, Peter Cock, Nomi Harris, Chris Fields, and Karen Cranston, as well as guests Heather Wiencko (Board candidate), Michael Crusoe, Spencer Bliven, and Robert Gilmore.

The agenda, and tentative minutes (taken by then-secretary Peter Cock) are available from the OBF wiki.  The following is a summary:

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