Gemma Turon, PhD spoke at an ISCBacademy webinar on March 5, 2024. Her talk was entitled “Ersilia, open source AI/ML for (antimicrobial) drug discovery”. The talk video is now available on YouTube: https://www.youtube.com/watch?v=xcEkCuJpZbw. Dr. Turon’s bio and talk abstract can be found in this blog post.
<strong>Spotlight on diversity: Jenea Adams</strong>
Diversity, inclusion and accessibility (also known as Diversity, Equity and Inclusion, DEI) are a major part of BOSC’s mission and core values, and we pursue these goals in multiple ways. BOSC 2022, for example, included a panel on Building and Sustaining Inclusive Open Science Communities, with panelists who not only were experts on the topic but also themselves belong to various groups that are typically underrepresented in our community. And with generous support from our sponsors, each year we provide free registration to 10-20 BOSC participants as part of the OBF Event Fellowship program), which aims to increase diverse participation at events related to open source bioinformatics and open science.
[Read More]
<strong>Microbiome (k)nights</strong>
The Open Bioinformatics Foundation (OBF) Event Fellowship program aims to promote diverse participation at events promoting open source bioinformatics software development and open science practices in the biological research community. Luise Rauer, a PhD student at the Technical University of Munich, was awarded an OBF Event Fellowship to participate virtually in the 9th International Human Microbiome Consortium (IHMC) conference in November 2022.
What do a total lunar eclipse and the 9th International Human Microbiome Consortium (IHMC) conference have in common?
[Read More]
OBF Community Support Sponsorship scheme funds first pilot project
The OBF Community Support Sponsorship scheme aims to sponsor small open-source-focused events like a scientific meeting, small conference, training workshop, hackathon, or time-limited series like monthly seminars. See details in this post. One application was funded under this program to prototype the workflow, with OBF offering financial support for a seminar series hosted by the Bioinformatics Hub Kenya. Congratulations to Michael Kofia Landi for leading this application and working collaboratively with the BHKi team – Pauline Karega, David Kiragu, Margaret Wanjiku and Festus Nyasimi – and OBF Board including Treasurer Heather Wiencko, to help establish a process for this new type of OBF funding.
[Read More]
Reflections from my 3 years on the OBF Board - Malvika Sharan
Thank You. Photo by Aaron Burden on Unsplash
I have reached the end of my term after working with the OBF board members since 2019 and have stepped down from the board. It is bittersweet! I will miss seeing my colleagues from OBF in monthly calls, but also, this comes with an opportunity to make space for new voices to come into the leadership role of the Open Bioinformatics Foundation.
[Read More]
My trip to the EMBO neural stem cells workshop
The Open Bioinformatics Foundation (OBF) Event Fellowship program aims to promote diverse participation at events promoting open source bioinformatics software development and open science practices in the biological research community. Jemima Becker, DPhil student at Merton College, University of Oxford, attended the EMBO workshop: “Neural stem cells: From basic understanding to translational applications", supported by this fellowship granted to him in the first round of 2022.
This June, I had the opportunity to travel to the EMBO workshop: “Neural stem cells: From basic understanding to translational applications”.
[Read More]
Round-Ups from 2021 OBF Fellowship Awardees
The Open Bioinformatics Foundation (OBF) Event Fellowship program aims to support and encourage diverse participation at events focusing on open source bioinformatics software development and open science practices in the biological research community. Each year we open two calls for applications, deadlines for which are 1 April and 1 October.
In 2021, we received 15 applications, of which three applicants, Sona Charles (Indian Institute of Spices Research, India), Anshika Sah (Institute of Home Economics, India) and Rupesh Gelal (Nepal Engineering College, Nepal) were awarded funding across the two open calls.
[Read More]
Updates from the OBF Event Fellowship Chairs
We are delighted to announce that Caleb Kibet and Hilyatuz Zahroh, two members who recently joined the OBF board, will be joining Malvika Sharan as the co-chairs of the OBF Event Fellowship program. Inviting contributions from the OBF board members, as well as bringing insights from their lived experiences, Caleb, Hilya and Malvika will re-evaluate how we can manage the OBF Event fellowship more effectively going forward.
There is a growing body of evidence, including the report from BOSC 2021, that virtual events are indeed more equitable for our colleagues from the Global South (see references: [1] & [2]), who were inadvertently excluded from most international events which required expensive travelling before the pandemic.
[Read More]
Google Summer of Code 2022 - time for project ideas!
Hi everyone!
My name is Melissa and I’m happy to be collaborating with OBF as lead GSoC admin this year along with support from Yo Yehudi. I had a great (virtual) time at BOSC 2021 as an Outreachy intern and am glad to be supporting another internship program this year.
It’s time to start coming up with GSoC project ideas again! Below is some info that should help with that.
[Read More]
ISCBacademy webinar Feb 22: Yo Yehudi
Date & Time: Tuesday, February 22, 2022, 15:00 UTC / 11am EDT
Location: online webinar hosted by ISCB
Speaker: Yo Yehudi, Open Life Science (former OBF board member and Google Summer of Code admin & mentor)
Topic: Growing open source communities with internships
The ISCB, which runs the annual ISMB conference, is offering a series of ISCBacademy webinars hosted by the Communities of Special Interest (COSIs), which include BOSC/OBF. These webinars are free to ISCB members.
[Read More]