Archiving the OBF blog via Rogue Scholar

The websites and blog posts of the OBF go back a long way, with the first posts having been published all the way back in June 2001. Keeping them accessible and findable under stable links is not an easy feat, especially given that since 2001 we’ve changed the way we create and serve those pages more than once, most recently in March of this year. And while we have successfully managed to do so, we thought it would be nice to have some backup plans in place. [Read More]

Welcome to the new OBF website!

Over the past few weeks, we have been working behind the scenes to migrate our website, resulting in the page that you currently have in front of you! Our pages are now generated by the Go-based, open source static site generator Hugo, and are stored on GitHub. All old URLs should continue working as before, but if you run into any missing pages or other issues, please let us know by submitting an issue or contacting us via the channels linked in the page footer. [Read More]

Yvonne Walburga: Journeys across oceans

The Open Bioinformatics Foundation (OBF) Event Fellowship program aims to promote diverse participation at events promoting open-source bioinformatics software development and open science practices in the biological research community. Dr Yvonne Joko Walburga, a Post-doc at the University of Cambridge, was awarded an OBF Event Fellowship to attend the African Organisation for Research and Training in Cancer (AORTIC) Cancer Conference. I initially applied for the OBF Travel Fellowship to attend the African Organisation for Research and Training in Cancer (AORTIC) Genomics Conference, and was accepted, but the timing was too tight. [Read More]

Michell Salcan: My Wonderful Experience at LANET 2023 in Cusco, Peru

The Open Bioinformatics Foundation (OBF) Event Fellowship program aims to promote diverse participation at events promoting open-source bioinformatics software development and open science practices in the biological research community. Michell Salcan, an undergraduate at the Universidad Regional Amazonica Ikiami, was awarded an OBF Event Fellowship to atten d The 3rd Latin American Conference on Complex Networks in Cusco, Peru. The week of August 21 to 25 has been one of the most beautiful and satisfying experiences of my personal life and the beginning of my professional life because I had the opportunity to attend and present my undergraduate thesis at the LANET 2023 event. [Read More]

Daniela Senra: My Experience at the Human Cell Atlas General Meeting 2023

The Open Bioinformatics Foundation (OBF) Event Fellowship program aims to promote diverse participation at events promoting open-source bioinformatics software development and open science practices in the biological research community. Daniela Senra, a PhD researcher at Centro Regional de Estudios Genómicos, Universidad Nacional de La Plata, was awarded an OBF Event Fellowship to attend the Human Cell Atlas General Meeting 2023. In July, I had the incredible opportunity to attend and present a lightning talk at the Human Cell Atlas General Meeting 2023, that took place in the city of Toronto, Canada, from July 10th to July 12th, 2023. [Read More]

Ruth Nanjala: My experience attending and participating at the ICHG 2023 conference hosted in the Mother City

The Open Bioinformatics Foundation (OBF) Event Fellowship program aims to promote diverse participation at events promoting open-source bioinformatics software development and open science practices in the biological research community. Ruth Nanjala, a DPhil student in Cellular and Molecular Medicine at the University of Oxford, was awarded an OBF Event Fellowship to attend the International Congress of Human Genetics (ICHG) 2023 conference. Earlier in 2022, I received the Open Bioinformatics Foundation (OBF) Event Fellowship for participating and promoting open science at the American Society of Human Genetics (ASHG) 2022 conference in Los Angeles. [Read More]

Call for applications for the first round of OBF Event Fellowship 2023 & overview of the second 2022 round

The call for applications for the OBF Event Fellowship 2023, round 1, is now open. The deadline for this round is 1 April 2023. Applications should be submitted via this Google Form. We have provided a Word template to help you draft the application locally before filling the form – make a copy of this template.The OBF Event Fellowship program aims to increase diverse participation at events that promote open source bioinformatics and/or open science. [Read More]

OBF Public Board Meeting, 2022-10-21

Date, Time, and How to Join Date and time: 2022-10-21, 15:00 UTC (8am PT / 11am ET / 4pm UK) Agenda Board Officer Elections Chris Fields wishes to step down as Secretary, and Nomi Harris is standing for election to this role This will be an electronic ballot of the current board members Elections to the Board Iddo Friedberg, running for Board member at-large ( statement of interest) This will be an electronic ballot of the current board members Bylaw Changes We periodically review our bylaws Changes must formally approved by the Board at a public board meeting We plan minor changes to avoid gendered language, including subsuming the Secretary role (with historical gendered associations) into a Vice President role. [Read More]

New Code of Conduct, Community Support Sponsorship approved by OBF membership vote

As previously described, during the November 2021 public Board meeting, the OBF announced two new initiatives to be voted on by the OBF membership. Both of these received a large majority of votes: OBF Community Support Sponsorship (53 for, 3 against, 2 abstaining) OBF Code of Conduct (54 for, 2 against, 1 abstaining) The work to set up the new Community Support Sponsorship is underway. The new Code of Conduct is now available on the OBF website. [Read More]

ISCBacademy webinar Feb 22: Yo Yehudi

Date & Time: Tuesday, February 22, 2022, 15:00 UTC / 11am EDT Location: online webinar hosted by ISCB Speaker: Yo Yehudi, Open Life Science (former OBF board member and Google Summer of Code admin & mentor) Topic: Growing open source communities with internships The ISCB, which runs the annual ISMB conference, is offering a series of ISCBacademy webinars hosted by the Communities of Special Interest (COSIs), which include BOSC/OBF. These webinars are free to ISCB members. [Read More]