Google Summer of Code 2010

The OBF was accepted into the 2010 Google Summer of Code (GSoC) program as an umbrella organization for all OBF-affiliated projects. Program Timeline.

2010 Funded Students and Projects (6 students)

BioJava: Improvements including Implementation of Multiple Sequence Alignment Algorithms

student Mark Chapman, primary mentor Andreas Prlic, overview and updates

BioJava: Packages for Identification, Classification, and Visualization of Posttranslational Modification of Proteins

student Jianjiong Gao, primary mentor Peter Rose, more information on this project

BioPerl: BioPerl Alignment Subsystem Refactoring

student Jun Yin, primary mentor Chris Fields, secondary mentor Mark Jensen, more information on this project, overview and updates

BioPython: Extending Bio.PDB: broadening the usefulness of BioPython’s Structural Biology module

student João Rodrigues, primary mentor Eric Talevich, Weekly Schedule & Progress Overview, Project's Code on GitHub

BioRuby: Ruby 1.9.2 support of BioRuby

student Kazuhiro Hayashi, primary mentor Naohisa Goto, overview and updates

BioRuby: Implementing Speciation & Duplication Inference Algorithm for Binary and Non-binary Species Tree

student Sara Rayburn, primary mentor Christian Zmasek, secondary mentor Diana Jaunzeikare, overview and updates