-

Difference between revisions of "BOSC 2010 Schedule"

From Open Bioinformatics Foundation
Jump to: navigation, search
(List of confirmed speakers from submitted abstracts: partially formatted)
(List of confirmed speakers from submitted abstracts: list of titles with links to abstracts)
Line 21: Line 21:
  
 
Click on the talk title to view the abstract as a PDF file.
 
Click on the talk title to view the abstract as a PDF file.
<!--
+
 
 
* [[Media:22_BOSC2010.pdf | Towards a Modern BioPerl: BioPerl Update 2010]]
 
* [[Media:22_BOSC2010.pdf | Towards a Modern BioPerl: BioPerl Update 2010]]
 
* [[Media:15_BOSC2010.pdf | BioRuby 2010 updates: moving to agile bioinformatics]]
 
* [[Media:15_BOSC2010.pdf | BioRuby 2010 updates: moving to agile bioinformatics]]
Line 38: Line 38:
 
* [[Media:5_BOSC2010.pdf | Long-term availability of bioinformatics web services]]
 
* [[Media:5_BOSC2010.pdf | Long-term availability of bioinformatics web services]]
 
* [[Media:6_BOSC2010.pdf | G-language Bookmarklet: a gateway for Semantic Web, Linked Data, and Web Services]]
 
* [[Media:6_BOSC2010.pdf | G-language Bookmarklet: a gateway for Semantic Web, Linked Data, and Web Services]]
21. ONTO-ToolKit: enabling bio-ontology engineering via Galaxy
+
* [[Media:21_BOSC2010.pdf | ONTO-ToolKit: enabling bio-ontology engineering via Galaxy]]
25. Connecting TOPSAN to Computational Analysis
+
* [[Media:25_BOSC2010.pdf | Connecting TOPSAN to Computational Analysis]]
20. Musite: Global Prediction of General and Kinase-Specific Phosphorylation Sites
+
* [[Media:20_BOSC2010.pdf | Musite: Global Prediction of General and Kinase-Specific Phosphorylation Sites]]
36. Building Bioinformatics Web Application with Clickframes
+
* [[Media:36_BOSC2010.pdf | Building Bioinformatics Web Application with Clickframes]]
24. MOLGENIS: rapid prototyping of biosoftware at the push of a button
+
* [[Media:24_BOSC2010.pdf | MOLGENIS: rapid prototyping of biosoftware at the push of a button]]
17. Generating a data platform for microarray gene expression experiments using MOLGENIS and MAGE-TAB
+
* [[Media:17_BOSC2010.pdf | Generating a data platform for microarray gene expression experiments using MOLGENIS and MAGE-TAB]]
19. The Goby framework: towards efficient next-generation sequencing data analysis
+
* [[Media:10_BOSC2010.pdf | BioHDF: Open binary file formats for NGS data - current status and future directions]]
10. BioHDF: Open binary file formats for NGS data - current status and future directions
+
* [[Media:30_BOSC2010.pdf | Automated Annotation of NGS Transcriptome Data using ISGA and Ergatis]]
30. Automated Annotation of NGS Transcriptome Data using ISGA and Ergatis
+
* [[Media:12_BOSC2010.pdf | Cytoscape Web: An interactive, customizable web-based network browser]]
12. Cytoscape Web: An interactive, customizable web-based network browser
+
* [[Media:38_BOSC2010.pdf | Pathway Projector: Web-Based Zoomable Pathway Browser Using KEGG Atlas and Google Maps API]]
38. Pathway Projector: Web-Based Zoomable Pathway Browser Using KEGG Atlas and Google Maps API
+
* [[Media:34_BOSC2010.pdf | GBrowse2]]
34. GBrowse2
+
* [[Media:11_BOSC2010.pdf | Fiji Is Just ImageJ - an Open Source platform for biological image analysis]]
7. Evoker: a visualization tool for genotype intensity data
+
* [[Media:32_BOSC2010.pdf | IPRStats: visualization and analysis of InterProScan Results]]
11. Fiji Is Just ImageJ - an Open Source platform for biological image analysis
+
* [[Media:9_BOSC2010.pdf | The Microsoft Biology Foundation]]
32. IPRStats: visualization and analysis of InterProScan Results
+
* [[Media:28_BOSC2010.pdf | Concurrent Bioinformatics Software for Discovering Genome-wide Patterns and Word-based Genomic Signatures]]
9. The Microsoft Biology Foundation
 
28. Concurrent Bioinformatics Software for Discovering Genome-wide Patterns and Word-based Genomic Signatures
 
-->
 

Revision as of 21:42, 19 May 2010

Keynote Speakers

Guy Coates

Guy Coates, Group leader of the Informatics Systems Group at the Wellome Trust Sanger Institute, will be one of our keynote speakers at BOSC 2010. Guy Coates is an expert in large Linux/Unix systems architecture, management and application optimization, next-gen DNA sequencing pipelines, very large database systems (>50TB), and high performance compute clusters (1500+ CPUs). He will lead off the conference, with a talk entitled:

Clouds: all fluff and no substance? Cloud architectures have made plenty of impact in the press over the past 18 months, but have they made any impact in solving real bioinformatics challenges? This talk will detail the Sanger Institute's experiences with the cloud, both good and bad, and ask what needs to be done to prepare the cloud for the era of commodity sequencing and $500 genomes.

Ross Gardler

Our other keynote speaker will be Ross Gardler, Vice President for Community Development at the Apache Software Foundation and Manager for OSS Watch (University of Oxford), which helps institutions and projects in the UK that are using or developing free and open source software. He has also performed Computer Science and Management research and teaching in both the UK and West Indies. In his talk, he will share with the O|B|F community the insights he has gained in community building for Apache and other open source projects.

List of confirmed speakers from submitted abstracts

This list is in no particular order, the exact schedule of talks will be forthcoming.

Click on the talk title to view the abstract as a PDF file.