Difference between revisions of "Projects"

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==Affiliated projects==
 
==Affiliated projects==
 
* [http://www.gmod.org/ggb Generic Genome Browser] - part of [http://www.gmod.org GMOD]
 
* [http://www.gmod.org/ggb Generic Genome Browser] - part of [http://www.gmod.org GMOD]
* [http://www.pasteur.fr/recherche/unites/sis/Pise/ Pise]
+
* [http://www.gmod.org/schema/ Chado] - The GMOD DB schema
* [http://industry.ebi.ac.uk/openBQS/ openBQS]
+
* [http://www.pasteur.fr/recherche/unites/sis/Pise/ Pise] - a tool to generate Web interfaces software for submitting jobs to these interfaces
 +
* [http://industry.ebi.ac.uk/openBQS/ openBQS] - Bibliographic query system
 +
* [http://blipkit.org BlipKit] - Chris Mungall's Prolog toolkit for Bioinformatics and BioMedical Informatics
 +
* [http://skam.sourceforge.net/ BioMake & Skam] - Task management tool, similar to makefiles
 +
 
 +
==Other related projects==
 +
* [http://biophp.org BioPHP]
 +
* [http://www.yandell-lab.org/cgl/ CGL] - Comparative Genomics Library
 +
 
 +
==Ontologies and Definitions==
 +
* [http://www.fruitfly.org/chaos-xml/ Chaos-XML] - File format based on the sequence modules of the Chado relational schema
 +
* [http://song.sourceforge.net/ Sequence Ontology]
 +
* [http://geneontology.org/ Gene Ontology]
 +
* [http://wikiomics.org Wikiomics]
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* [http://www.fruitfly.org/~cjm/obol/ Obol]

Revision as of 20:44, 15 January 2006

Main projects

Affiliated projects

  • Generic Genome Browser - part of GMOD
  • Chado - The GMOD DB schema
  • Pise - a tool to generate Web interfaces software for submitting jobs to these interfaces
  • openBQS - Bibliographic query system
  • BlipKit - Chris Mungall's Prolog toolkit for Bioinformatics and BioMedical Informatics
  • BioMake & Skam - Task management tool, similar to makefiles

Other related projects

Ontologies and Definitions