| Please visit our ***NEW*** OBF/BOSC website: https://www.open-bio.org/ |
-
Difference between revisions of "Sambamba"
From Open Bioinformatics Foundation
(Sambamba suppl. material) |
|||
| Line 4: | Line 4: | ||
https://github.com/lomereiter/sambamba | https://github.com/lomereiter/sambamba | ||
| + | |||
| + | The Sambamba paper is currently under review. Supplementary material can be found [https://github.com/pjotrp/smb_performance here]. | ||
Revision as of 06:19, 20 December 2014
Sambamba is a high performance modern robust and fast tool (and library), written in the D programming language, for working with SAM, BAM and CRAM formats. Current parallelised functionality is an important subset of samtools functionality, including view, index, sort, markdup, mpileup and depth.
For more information see
https://github.com/lomereiter/sambamba
The Sambamba paper is currently under review. Supplementary material can be found here.
