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Difference between revisions of "BOSC 2008 schedule"
From Open Bioinformatics Foundation
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| − | ===BOSC 2008 Schedule=== | + | <div class=Section1> |
| + | |||
| + | <p class=MsoNormal style='margin-left:.25in;text-indent:-.25in'><b | ||
| + | style='mso-bidi-font-weight:normal'><span style='font-size:16.0pt;font-family: | ||
| + | Arial'>Schedule (Day 1)</span></b></p> | ||
| + | |||
| + | <table class=MsoTableGrid border=1 cellspacing=0 cellpadding=0 | ||
| + | style='border-collapse:collapse;border:none;mso-border-alt:solid windowtext .5pt; | ||
| + | mso-yfti-tbllook:480;mso-padding-alt:0in 5.4pt 0in 5.4pt;mso-border-insideh: | ||
| + | .5pt solid windowtext;mso-border-insidev:.5pt solid windowtext'> | ||
| + | <tr style='mso-yfti-irow:0;mso-yfti-firstrow:yes'> | ||
| + | <td width=638 colspan=3 valign=top style='width:6.65in;border:solid windowtext 1.0pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
| + | style='font-size:11.0pt'>Friday, July18</span></b></p> | ||
| + | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
| + | style='font-size:11.0pt'></span></b></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:1'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>9:00-9:15</span></p> | ||
| + | </td> | ||
| + | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>Kam Dahlquist (Chair BOSC | ||
| + | 2008)</span></p> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>Jason Stajich (President | ||
| + | O|B|F)</span></p> | ||
| + | </td> | ||
| + | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>[welcome] Open | ||
| + | Bioinformatics Foundation Update</span></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:2'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>9:15-10:15</span></p> | ||
| + | </td> | ||
| + | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>Julian Lombardi</span></p> | ||
| + | </td> | ||
| + | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span lang=EN style='font-size:11.0pt;mso-ansi-language: | ||
| + | EN;mso-bidi-font-weight:bold'>[keynote] Croquet: An Open Collaboration | ||
| + | Architecture for Scientific Visualization and Simulation</span><span | ||
| + | style='font-size:11.0pt'></span></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:3'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
| + | style='font-size:11.0pt'>10:15-10:45</span></b></p> | ||
| + | </td> | ||
| + | <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none; | ||
| + | border-left:none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
| + | style='font-size:11.0pt'>Coffee Break</span></b></p> | ||
| + | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
| + | style='font-size:11.0pt'></span></b></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:4'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>10:45-11:05</span></p> | ||
| + | </td> | ||
| + | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>Hervé Ménager </span></p> | ||
| + | </td> | ||
| + | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>[cyberinfrastructure] | ||
| + | Mobyle: a New Full Web Bioinformatics Framework</span></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:5'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>11:05-11:30<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>Richard Smith<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>[cyberinfrastructure] | ||
| + | Intermine – Open Source Data Warehouse and Query Interface<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:6'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>11:30-12:05<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>Paul Gordon<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>[cyberinfrastructure] Bridging | ||
| + | Existing Bioinformatics Tools and Data into Semantic Web Services<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:7'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>12:05-12:25<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>Peter Rice<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>[cyberinfrastructure] | ||
| + | Soaplab2: More Reliable Sesame Door to Bioinformatics Programs<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:8'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
| + | style='font-size:11.0pt'>12:30-1:30<o:p></o:p></span></b></p> | ||
| + | </td> | ||
| + | <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none; | ||
| + | border-left:none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
| + | style='font-size:11.0pt'>Lunch<o:p></o:p></span></b></p> | ||
| + | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
| + | style='font-size:11.0pt'><o:p> </o:p></span></b></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:9'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>1:30-1:50<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>Barry Sanders & David Arcoleo<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>[cyberinfrastructure] | ||
| + | BeeSpace:<span style='mso-spacerun:yes'> </span>An Interactive System for | ||
| + | Functional Analysis<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:10'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>1:50-2:10<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>Andrew Jenkinson<o:p></o:p></span></p> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'><o:p> </o:p></span></p> | ||
| + | </td> | ||
| + | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>[cyberinfrastructure] | ||
| + | BioDas Project Update<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:11'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>2:10-2:30<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>Kazuharu Arakawa<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>[visualization] E-Cell 3D: 3-Dimensional | ||
| + | Visualization of Dynamic Cell Simulation<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:12'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>2:30-2:50<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>Peter Rice<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>[bio*update] EMBOSS: | ||
| + | European Molecular Biology Open Software Suite<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:13'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>2:50-3:10<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>Michael Heuer<o:p></o:p></span></p> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'><o:p> </o:p></span></p> | ||
| + | </td> | ||
| + | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>[bio*update] BioJava | ||
| + | Project Update<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:14'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>3:10-3:15<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>Justin Wilson<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>[lightning talk] Use the | ||
| + | Make Utility for the Maintenance of Complex Bioinformatics Pipelines<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:15'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>3:15-3:30<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none; | ||
| + | border-left:none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>Additional Lightning | ||
| + | Talks/Demos/Birds of a Feather<o:p></o:p></span></p> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>See | ||
| + | <http://www.open-bio.org/wiki/BOSC_2008_schedule> for updated listings<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:16'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
| + | style='font-size:11.0pt'>3:30-4:00<o:p></o:p></span></b></p> | ||
| + | </td> | ||
| + | <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none; | ||
| + | border-left:none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
| + | style='font-size:11.0pt'>Coffee Break<o:p></o:p></span></b></p> | ||
| + | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
| + | style='font-size:11.0pt'><o:p> </o:p></span></b></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:17;mso-yfti-lastrow:yes'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>4:00-5:30<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none; | ||
| + | border-left:none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>Lightning Talks/Demos/BOFs<o:p></o:p></span></p> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'><o:p> </o:p></span></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | </table> | ||
| + | |||
| + | <p class=MsoNormal><o:p> </o:p></p> | ||
| + | |||
| + | <span style='font-size:12.0pt;font-family:"Times New Roman";mso-fareast-font-family: | ||
| + | "Times New Roman";mso-ansi-language:EN-US;mso-fareast-language:EN-US; | ||
| + | mso-bidi-language:AR-SA'><br clear=all style='page-break-before:always'> | ||
| + | </span> | ||
| + | |||
| + | <p class=MsoNormal style='margin-left:.25in;text-indent:-.25in'><b | ||
| + | style='mso-bidi-font-weight:normal'><span style='font-size:16.0pt;font-family: | ||
| + | Arial'>2.<span style='mso-tab-count:1'> </span>Schedule (Day 2)<o:p></o:p></span></b></p> | ||
| + | |||
| + | <p class=MsoNormal><o:p> </o:p></p> | ||
| + | |||
| + | <table class=MsoTableGrid border=1 cellspacing=0 cellpadding=0 | ||
| + | style='border-collapse:collapse;border:none;mso-border-alt:solid windowtext .5pt; | ||
| + | mso-yfti-tbllook:480;mso-padding-alt:0in 5.4pt 0in 5.4pt;mso-border-insideh: | ||
| + | .5pt solid windowtext;mso-border-insidev:.5pt solid windowtext'> | ||
| + | <tr style='mso-yfti-irow:0;mso-yfti-firstrow:yes'> | ||
| + | <td width=638 colspan=3 valign=top style='width:6.65in;border:solid windowtext 1.0pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
| + | style='font-size:11.0pt'>Saturday, July 19<o:p></o:p></span></b></p> | ||
| + | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
| + | style='font-size:11.0pt'><o:p> </o:p></span></b></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:1'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>9:00-9:05<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>Kam Dahlquist<o:p></o:p></span></p> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'><o:p> </o:p></span></p> | ||
| + | </td> | ||
| + | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>Announcements<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:2'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>9:05-9:30<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>Mark Wilkinson<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>[workflows] Interoperability | ||
| + | with BioMoby – Past, Present, and Future<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:3'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>9:30-9:55<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>Joshua Orvis<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>[workflows] Ergatis: A | ||
| + | Web-based Bioinformatics Pipeline Management and Collaborative Development | ||
| + | System<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:4'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>9:55-10:15<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>Aleksi Kallio<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>[workflows] Chipster – User | ||
| + | Friendly DNA Microarray Analysis Software<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:5'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
| + | style='font-size:11.0pt'>10:15-10:45<o:p></o:p></span></b></p> | ||
| + | </td> | ||
| + | <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none; | ||
| + | border-left:none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
| + | style='font-size:11.0pt'>Coffee Break<o:p></o:p></span></b></p> | ||
| + | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
| + | style='font-size:11.0pt'><o:p> </o:p></span></b></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:6'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>10:45-11:10<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>Jiten Bhagat<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>[workflows] myExperiment: | ||
| + | Social Software for Sharing Workflows<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:7'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>11:10-11:30<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>Todd Smith<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>[workflows] BioHDF: Open Binary | ||
| + | File Formats for Large Scale Data Management<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:8'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>11:30-11:50<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>Aaron Kitzmiller<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>[open source software] The | ||
| + | Open HeliSphere<sup>TM</sup> Project: True Open Source from the Inventors of | ||
| + | True Single Molecule Sequencing<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:9'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>11:50-12:10<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>Ed Lee<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>[open source software] | ||
| + | Apollo: a Sequence Annotation Editor (with demonstration to follow)<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:10'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
| + | style='font-size:11.0pt'>12:30-1:30<o:p></o:p></span></b></p> | ||
| + | </td> | ||
| + | <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none; | ||
| + | border-left:none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
| + | style='font-size:11.0pt'>Lunch<o:p></o:p></span></b></p> | ||
| + | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
| + | style='font-size:11.0pt'><o:p> </o:p></span></b></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:11'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>1:30-1:50<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>Hilmar Lapp<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>[bio*update] BioSQL | ||
| + | Reloaded: 1.0 Release, PhyloDB Module, and Future Features<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:12'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>1:50-2:10<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>Syed Haider<o:p></o:p></span></p> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'><o:p> </o:p></span></p> | ||
| + | </td> | ||
| + | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>[bio*update] EMBRACE – | ||
| + | BioMart Developments and Future<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:13'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>2:10-2:30<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=136 valign=top style='width:102.0pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>Tiago Antão <o:p></o:p></span></p> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'><o:p> </o:p></span></p> | ||
| + | </td> | ||
| + | <td width=407 valign=top style='width:305.4pt;border-top:none;border-left: | ||
| + | none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>[bio*update] Biopython | ||
| + | Project Update<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:14'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>2:30-3:30<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none; | ||
| + | border-left:none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>Lightning Talks/Demos/BOFs<o:p></o:p></span></p> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>See | ||
| + | <http://www.open-bio.org/wiki/BOSC_2008_schedule> for updated listings<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:15;height:4.45pt'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt;height:4.45pt'> | ||
| + | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
| + | style='font-size:11.0pt'>3:30-4:00<o:p></o:p></span></b></p> | ||
| + | </td> | ||
| + | <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none; | ||
| + | border-left:none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt;height:4.45pt'> | ||
| + | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
| + | style='font-size:11.0pt'>Coffee Break<o:p></o:p></span></b></p> | ||
| + | <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span | ||
| + | style='font-size:11.0pt'><o:p> </o:p></span></b></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr style='mso-yfti-irow:16;mso-yfti-lastrow:yes'> | ||
| + | <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt; | ||
| + | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
| + | padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>4:00-5:30<o:p></o:p></span></p> | ||
| + | </td> | ||
| + | <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none; | ||
| + | border-left:none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt; | ||
| + | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
| + | mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'>Lightning Talks/Demos/BOFs<o:p></o:p></span></p> | ||
| + | <p class=MsoNormal><span style='font-size:11.0pt'><o:p> </o:p></span></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | </table> | ||
Revision as of 17:13, 9 June 2008
Schedule (Day 1)
|
Friday, July18
|
||
|
9:00-9:15 |
Kam Dahlquist (Chair BOSC 2008) Jason Stajich (President O|B|F) |
[welcome] Open Bioinformatics Foundation Update |
|
9:15-10:15 |
Julian Lombardi |
[keynote] Croquet: An Open Collaboration Architecture for Scientific Visualization and Simulation |
|
10:15-10:45 |
Coffee Break
|
|
|
10:45-11:05 |
Hervé Ménager |
[cyberinfrastructure] Mobyle: a New Full Web Bioinformatics Framework |
|
11:05-11:30<o:p></o:p> |
Richard Smith<o:p></o:p> |
[cyberinfrastructure] Intermine – Open Source Data Warehouse and Query Interface<o:p></o:p> |
|
11:30-12:05<o:p></o:p> |
Paul Gordon<o:p></o:p> |
[cyberinfrastructure] Bridging Existing Bioinformatics Tools and Data into Semantic Web Services<o:p></o:p> |
|
12:05-12:25<o:p></o:p> |
Peter Rice<o:p></o:p> |
[cyberinfrastructure] Soaplab2: More Reliable Sesame Door to Bioinformatics Programs<o:p></o:p> |
|
12:30-1:30<o:p></o:p> |
Lunch<o:p></o:p> <o:p> </o:p> |
|
|
1:30-1:50<o:p></o:p> |
Barry Sanders & David Arcoleo<o:p></o:p> |
[cyberinfrastructure] BeeSpace: An Interactive System for Functional Analysis<o:p></o:p> |
|
1:50-2:10<o:p></o:p> |
Andrew Jenkinson<o:p></o:p> <o:p> </o:p> |
[cyberinfrastructure] BioDas Project Update<o:p></o:p> |
|
2:10-2:30<o:p></o:p> |
Kazuharu Arakawa<o:p></o:p> |
[visualization] E-Cell 3D: 3-Dimensional Visualization of Dynamic Cell Simulation<o:p></o:p> |
|
2:30-2:50<o:p></o:p> |
Peter Rice<o:p></o:p> |
[bio*update] EMBOSS: European Molecular Biology Open Software Suite<o:p></o:p> |
|
2:50-3:10<o:p></o:p> |
Michael Heuer<o:p></o:p> <o:p> </o:p> |
[bio*update] BioJava Project Update<o:p></o:p> |
|
3:10-3:15<o:p></o:p> |
Justin Wilson<o:p></o:p> |
[lightning talk] Use the Make Utility for the Maintenance of Complex Bioinformatics Pipelines<o:p></o:p> |
|
3:15-3:30<o:p></o:p> |
Additional Lightning Talks/Demos/Birds of a Feather<o:p></o:p> See <http://www.open-bio.org/wiki/BOSC_2008_schedule> for updated listings<o:p></o:p> |
|
|
3:30-4:00<o:p></o:p> |
Coffee Break<o:p></o:p> <o:p> </o:p> |
|
|
4:00-5:30<o:p></o:p> |
Lightning Talks/Demos/BOFs<o:p></o:p> <o:p> </o:p> |
|
<o:p> </o:p>
2. Schedule (Day 2)<o:p></o:p>
<o:p> </o:p>
|
Saturday, July 19<o:p></o:p> <o:p> </o:p> |
||
|
9:00-9:05<o:p></o:p> |
Kam Dahlquist<o:p></o:p> <o:p> </o:p> |
Announcements<o:p></o:p> |
|
9:05-9:30<o:p></o:p> |
Mark Wilkinson<o:p></o:p> |
[workflows] Interoperability with BioMoby – Past, Present, and Future<o:p></o:p> |
|
9:30-9:55<o:p></o:p> |
Joshua Orvis<o:p></o:p> |
[workflows] Ergatis: A Web-based Bioinformatics Pipeline Management and Collaborative Development System<o:p></o:p> |
|
9:55-10:15<o:p></o:p> |
Aleksi Kallio<o:p></o:p> |
[workflows] Chipster – User Friendly DNA Microarray Analysis Software<o:p></o:p> |
|
10:15-10:45<o:p></o:p> |
Coffee Break<o:p></o:p> <o:p> </o:p> |
|
|
10:45-11:10<o:p></o:p> |
Jiten Bhagat<o:p></o:p> |
[workflows] myExperiment: Social Software for Sharing Workflows<o:p></o:p> |
|
11:10-11:30<o:p></o:p> |
Todd Smith<o:p></o:p> |
[workflows] BioHDF: Open Binary File Formats for Large Scale Data Management<o:p></o:p> |
|
11:30-11:50<o:p></o:p> |
Aaron Kitzmiller<o:p></o:p> |
[open source software] The Open HeliSphereTM Project: True Open Source from the Inventors of True Single Molecule Sequencing<o:p></o:p> |
|
11:50-12:10<o:p></o:p> |
Ed Lee<o:p></o:p> |
[open source software] Apollo: a Sequence Annotation Editor (with demonstration to follow)<o:p></o:p> |
|
12:30-1:30<o:p></o:p> |
Lunch<o:p></o:p> <o:p> </o:p> |
|
|
1:30-1:50<o:p></o:p> |
Hilmar Lapp<o:p></o:p> |
[bio*update] BioSQL Reloaded: 1.0 Release, PhyloDB Module, and Future Features<o:p></o:p> |
|
1:50-2:10<o:p></o:p> |
Syed Haider<o:p></o:p> <o:p> </o:p> |
[bio*update] EMBRACE – BioMart Developments and Future<o:p></o:p> |
|
2:10-2:30<o:p></o:p> |
Tiago Antão <o:p></o:p> <o:p> </o:p> |
[bio*update] Biopython Project Update<o:p></o:p> |
|
2:30-3:30<o:p></o:p> |
Lightning Talks/Demos/BOFs<o:p></o:p> See <http://www.open-bio.org/wiki/BOSC_2008_schedule> for updated listings<o:p></o:p> |
|
|
3:30-4:00<o:p></o:p> |
Coffee Break<o:p></o:p> <o:p> </o:p> |
|
|
4:00-5:30<o:p></o:p> |
Lightning Talks/Demos/BOFs<o:p></o:p> <o:p> </o:p> |
|
