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Difference between revisions of "BOSC 2008 schedule"

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(New page: ===BOSC 2008 Schedule===)
 
(BOSC 2008 Schedule)
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===BOSC 2008 Schedule===
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<div class=Section1>
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<p class=MsoNormal style='margin-left:.25in;text-indent:-.25in'><b
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style='mso-bidi-font-weight:normal'><span style='font-size:16.0pt;font-family:
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Arial'>Schedule (Day 1)</span></b></p>
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 +
<table class=MsoTableGrid border=1 cellspacing=0 cellpadding=0
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style='border-collapse:collapse;border:none;mso-border-alt:solid windowtext .5pt;
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mso-yfti-tbllook:480;mso-padding-alt:0in 5.4pt 0in 5.4pt;mso-border-insideh:
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.5pt solid windowtext;mso-border-insidev:.5pt solid windowtext'>
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<tr style='mso-yfti-irow:0;mso-yfti-firstrow:yes'>
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  <td width=638 colspan=3 valign=top style='width:6.65in;border:solid windowtext 1.0pt;
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  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'>Friday, July18</span></b></p>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'></span></b></p>
 +
  </td>
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</tr>
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<tr style='mso-yfti-irow:1'>
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  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
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  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
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  padding:0in 5.4pt 0in 5.4pt'>
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  <p class=MsoNormal><span style='font-size:11.0pt'>9:00-9:15</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
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  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
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  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Kam Dahlquist (Chair BOSC
 +
  2008)</span></p>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Jason Stajich (President
 +
  O|B|F)</span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
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  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
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  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
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  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[welcome] Open
 +
  Bioinformatics Foundation Update</span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:2'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
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  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>9:15-10:15</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
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  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
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  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Julian Lombardi</span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
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 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span lang=EN style='font-size:11.0pt;mso-ansi-language:
 +
  EN;mso-bidi-font-weight:bold'>[keynote] Croquet: An Open Collaboration
 +
  Architecture for Scientific Visualization and Simulation</span><span
 +
  style='font-size:11.0pt'></span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:3'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'>10:15-10:45</span></b></p>
 +
  </td>
 +
  <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none;
 +
  border-left:none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'>Coffee Break</span></b></p>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'></span></b></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:4'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>10:45-11:05</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Hervé Ménager </span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[cyberinfrastructure]
 +
  Mobyle: a New Full Web Bioinformatics Framework</span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:5'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>11:05-11:30<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Richard Smith<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[cyberinfrastructure]
 +
  Intermine – Open Source Data Warehouse and Query Interface<o:p></o:p></span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:6'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>11:30-12:05<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Paul Gordon<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[cyberinfrastructure] Bridging
 +
  Existing Bioinformatics Tools and Data into Semantic Web Services<o:p></o:p></span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:7'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>12:05-12:25<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Peter Rice<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[cyberinfrastructure]
 +
  Soaplab2: More Reliable Sesame Door to Bioinformatics Programs<o:p></o:p></span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:8'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'>12:30-1:30<o:p></o:p></span></b></p>
 +
  </td>
 +
  <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none;
 +
  border-left:none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'>Lunch<o:p></o:p></span></b></p>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'><o:p>&nbsp;</o:p></span></b></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:9'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>1:30-1:50<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Barry Sanders &amp; David Arcoleo<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[cyberinfrastructure]
 +
  BeeSpace:<span style='mso-spacerun:yes'>  </span>An Interactive System for
 +
  Functional Analysis<o:p></o:p></span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:10'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>1:50-2:10<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Andrew Jenkinson<o:p></o:p></span></p>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'><o:p>&nbsp;</o:p></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[cyberinfrastructure]
 +
  BioDas Project Update<o:p></o:p></span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:11'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>2:10-2:30<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Kazuharu Arakawa<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[visualization] E-Cell 3D: 3-Dimensional
 +
  Visualization of Dynamic Cell Simulation<o:p></o:p></span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:12'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>2:30-2:50<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Peter Rice<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[bio*update] EMBOSS:
 +
  European Molecular Biology Open Software Suite<o:p></o:p></span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:13'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>2:50-3:10<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Michael Heuer<o:p></o:p></span></p>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'><o:p>&nbsp;</o:p></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[bio*update] BioJava
 +
  Project Update<o:p></o:p></span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:14'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>3:10-3:15<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Justin Wilson<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[lightning talk] Use the
 +
  Make Utility for the Maintenance of Complex Bioinformatics Pipelines<o:p></o:p></span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:15'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>3:15-3:30<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none;
 +
  border-left:none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Additional Lightning
 +
  Talks/Demos/Birds of a Feather<o:p></o:p></span></p>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>See
 +
  &lt;http://www.open-bio.org/wiki/BOSC_2008_schedule&gt; for updated listings<o:p></o:p></span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:16'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'>3:30-4:00<o:p></o:p></span></b></p>
 +
  </td>
 +
  <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none;
 +
  border-left:none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'>Coffee Break<o:p></o:p></span></b></p>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'><o:p>&nbsp;</o:p></span></b></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:17;mso-yfti-lastrow:yes'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>4:00-5:30<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none;
 +
  border-left:none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Lightning Talks/Demos/BOFs<o:p></o:p></span></p>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'><o:p>&nbsp;</o:p></span></p>
 +
  </td>
 +
</tr>
 +
</table>
 +
 
 +
<p class=MsoNormal><o:p>&nbsp;</o:p></p>
 +
 
 +
<span style='font-size:12.0pt;font-family:"Times New Roman";mso-fareast-font-family:
 +
"Times New Roman";mso-ansi-language:EN-US;mso-fareast-language:EN-US;
 +
mso-bidi-language:AR-SA'><br clear=all style='page-break-before:always'>
 +
</span>
 +
 
 +
<p class=MsoNormal style='margin-left:.25in;text-indent:-.25in'><b
 +
style='mso-bidi-font-weight:normal'><span style='font-size:16.0pt;font-family:
 +
Arial'>2.<span style='mso-tab-count:1'> </span>Schedule (Day 2)<o:p></o:p></span></b></p>
 +
 
 +
<p class=MsoNormal><o:p>&nbsp;</o:p></p>
 +
 
 +
<table class=MsoTableGrid border=1 cellspacing=0 cellpadding=0
 +
style='border-collapse:collapse;border:none;mso-border-alt:solid windowtext .5pt;
 +
mso-yfti-tbllook:480;mso-padding-alt:0in 5.4pt 0in 5.4pt;mso-border-insideh:
 +
.5pt solid windowtext;mso-border-insidev:.5pt solid windowtext'>
 +
<tr style='mso-yfti-irow:0;mso-yfti-firstrow:yes'>
 +
  <td width=638 colspan=3 valign=top style='width:6.65in;border:solid windowtext 1.0pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'>Saturday, July 19<o:p></o:p></span></b></p>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'><o:p>&nbsp;</o:p></span></b></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:1'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>9:00-9:05<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Kam Dahlquist<o:p></o:p></span></p>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'><o:p>&nbsp;</o:p></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Announcements<o:p></o:p></span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:2'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>9:05-9:30<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Mark Wilkinson<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[workflows] Interoperability
 +
  with BioMoby – Past, Present, and Future<o:p></o:p></span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:3'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>9:30-9:55<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Joshua Orvis<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[workflows] Ergatis: A
 +
  Web-based Bioinformatics Pipeline Management and Collaborative Development
 +
  System<o:p></o:p></span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:4'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>9:55-10:15<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Aleksi Kallio<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[workflows] Chipster – User
 +
  Friendly DNA Microarray Analysis Software<o:p></o:p></span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:5'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'>10:15-10:45<o:p></o:p></span></b></p>
 +
  </td>
 +
  <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none;
 +
  border-left:none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'>Coffee Break<o:p></o:p></span></b></p>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'><o:p>&nbsp;</o:p></span></b></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:6'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>10:45-11:10<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Jiten Bhagat<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[workflows] myExperiment:
 +
  Social Software for Sharing Workflows<o:p></o:p></span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:7'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>11:10-11:30<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Todd Smith<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[workflows] BioHDF: Open Binary
 +
  File Formats for Large Scale Data Management<o:p></o:p></span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:8'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>11:30-11:50<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Aaron Kitzmiller<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[open source software] The
 +
  Open HeliSphere<sup>TM</sup> Project: True Open Source from the Inventors of
 +
  True Single Molecule Sequencing<o:p></o:p></span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:9'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>11:50-12:10<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Ed Lee<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[open source software]
 +
  Apollo: a Sequence Annotation Editor (with demonstration to follow)<o:p></o:p></span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:10'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'>12:30-1:30<o:p></o:p></span></b></p>
 +
  </td>
 +
  <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none;
 +
  border-left:none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'>Lunch<o:p></o:p></span></b></p>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'><o:p>&nbsp;</o:p></span></b></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:11'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>1:30-1:50<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Hilmar Lapp<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[bio*update] BioSQL
 +
  Reloaded: 1.0 Release, PhyloDB Module, and Future Features<o:p></o:p></span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:12'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>1:50-2:10<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Syed Haider<o:p></o:p></span></p>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'><o:p>&nbsp;</o:p></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[bio*update] EMBRACE –
 +
  BioMart Developments and Future<o:p></o:p></span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:13'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>2:10-2:30<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Tiago Antão <o:p></o:p></span></p>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'><o:p>&nbsp;</o:p></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[bio*update] Biopython
 +
  Project Update<o:p></o:p></span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:14'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>2:30-3:30<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none;
 +
  border-left:none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Lightning Talks/Demos/BOFs<o:p></o:p></span></p>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>See
 +
  &lt;http://www.open-bio.org/wiki/BOSC_2008_schedule&gt; for updated listings<o:p></o:p></span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:15;height:4.45pt'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt;height:4.45pt'>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'>3:30-4:00<o:p></o:p></span></b></p>
 +
  </td>
 +
  <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none;
 +
  border-left:none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt;height:4.45pt'>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'>Coffee Break<o:p></o:p></span></b></p>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'><o:p>&nbsp;</o:p></span></b></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:16;mso-yfti-lastrow:yes'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>4:00-5:30<o:p></o:p></span></p>
 +
  </td>
 +
  <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none;
 +
  border-left:none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Lightning Talks/Demos/BOFs<o:p></o:p></span></p>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'><o:p>&nbsp;</o:p></span></p>
 +
  </td>
 +
</tr>
 +
</table>

Revision as of 21:13, 9 June 2008

Schedule (Day 1)

Friday, July18

9:00-9:15

Kam Dahlquist (Chair BOSC 2008)

Jason Stajich (President O|B|F)

[welcome] Open Bioinformatics Foundation Update

9:15-10:15

Julian Lombardi

[keynote] Croquet: An Open Collaboration Architecture for Scientific Visualization and Simulation

10:15-10:45

Coffee Break

10:45-11:05

Hervé Ménager

[cyberinfrastructure] Mobyle: a New Full Web Bioinformatics Framework

11:05-11:30<o:p></o:p>

Richard Smith<o:p></o:p>

[cyberinfrastructure] Intermine – Open Source Data Warehouse and Query Interface<o:p></o:p>

11:30-12:05<o:p></o:p>

Paul Gordon<o:p></o:p>

[cyberinfrastructure] Bridging Existing Bioinformatics Tools and Data into Semantic Web Services<o:p></o:p>

12:05-12:25<o:p></o:p>

Peter Rice<o:p></o:p>

[cyberinfrastructure] Soaplab2: More Reliable Sesame Door to Bioinformatics Programs<o:p></o:p>

12:30-1:30<o:p></o:p>

Lunch<o:p></o:p>

<o:p> </o:p>

1:30-1:50<o:p></o:p>

Barry Sanders & David Arcoleo<o:p></o:p>

[cyberinfrastructure] BeeSpace:  An Interactive System for Functional Analysis<o:p></o:p>

1:50-2:10<o:p></o:p>

Andrew Jenkinson<o:p></o:p>

<o:p> </o:p>

[cyberinfrastructure] BioDas Project Update<o:p></o:p>

2:10-2:30<o:p></o:p>

Kazuharu Arakawa<o:p></o:p>

[visualization] E-Cell 3D: 3-Dimensional Visualization of Dynamic Cell Simulation<o:p></o:p>

2:30-2:50<o:p></o:p>

Peter Rice<o:p></o:p>

[bio*update] EMBOSS: European Molecular Biology Open Software Suite<o:p></o:p>

2:50-3:10<o:p></o:p>

Michael Heuer<o:p></o:p>

<o:p> </o:p>

[bio*update] BioJava Project Update<o:p></o:p>

3:10-3:15<o:p></o:p>

Justin Wilson<o:p></o:p>

[lightning talk] Use the Make Utility for the Maintenance of Complex Bioinformatics Pipelines<o:p></o:p>

3:15-3:30<o:p></o:p>

Additional Lightning Talks/Demos/Birds of a Feather<o:p></o:p>

See <http://www.open-bio.org/wiki/BOSC_2008_schedule> for updated listings<o:p></o:p>

3:30-4:00<o:p></o:p>

Coffee Break<o:p></o:p>

<o:p> </o:p>

4:00-5:30<o:p></o:p>

Lightning Talks/Demos/BOFs<o:p></o:p>

<o:p> </o:p>

<o:p> </o:p>


2. Schedule (Day 2)<o:p></o:p>

<o:p> </o:p>

Saturday, July 19<o:p></o:p>

<o:p> </o:p>

9:00-9:05<o:p></o:p>

Kam Dahlquist<o:p></o:p>

<o:p> </o:p>

Announcements<o:p></o:p>

9:05-9:30<o:p></o:p>

Mark Wilkinson<o:p></o:p>

[workflows] Interoperability with BioMoby – Past, Present, and Future<o:p></o:p>

9:30-9:55<o:p></o:p>

Joshua Orvis<o:p></o:p>

[workflows] Ergatis: A Web-based Bioinformatics Pipeline Management and Collaborative Development System<o:p></o:p>

9:55-10:15<o:p></o:p>

Aleksi Kallio<o:p></o:p>

[workflows] Chipster – User Friendly DNA Microarray Analysis Software<o:p></o:p>

10:15-10:45<o:p></o:p>

Coffee Break<o:p></o:p>

<o:p> </o:p>

10:45-11:10<o:p></o:p>

Jiten Bhagat<o:p></o:p>

[workflows] myExperiment: Social Software for Sharing Workflows<o:p></o:p>

11:10-11:30<o:p></o:p>

Todd Smith<o:p></o:p>

[workflows] BioHDF: Open Binary File Formats for Large Scale Data Management<o:p></o:p>

11:30-11:50<o:p></o:p>

Aaron Kitzmiller<o:p></o:p>

[open source software] The Open HeliSphereTM Project: True Open Source from the Inventors of True Single Molecule Sequencing<o:p></o:p>

11:50-12:10<o:p></o:p>

Ed Lee<o:p></o:p>

[open source software] Apollo: a Sequence Annotation Editor (with demonstration to follow)<o:p></o:p>

12:30-1:30<o:p></o:p>

Lunch<o:p></o:p>

<o:p> </o:p>

1:30-1:50<o:p></o:p>

Hilmar Lapp<o:p></o:p>

[bio*update] BioSQL Reloaded: 1.0 Release, PhyloDB Module, and Future Features<o:p></o:p>

1:50-2:10<o:p></o:p>

Syed Haider<o:p></o:p>

<o:p> </o:p>

[bio*update] EMBRACE – BioMart Developments and Future<o:p></o:p>

2:10-2:30<o:p></o:p>

Tiago Antão <o:p></o:p>

<o:p> </o:p>

[bio*update] Biopython Project Update<o:p></o:p>

2:30-3:30<o:p></o:p>

Lightning Talks/Demos/BOFs<o:p></o:p>

See <http://www.open-bio.org/wiki/BOSC_2008_schedule> for updated listings<o:p></o:p>

3:30-4:00<o:p></o:p>

Coffee Break<o:p></o:p>

<o:p> </o:p>

4:00-5:30<o:p></o:p>

Lightning Talks/Demos/BOFs<o:p></o:p>

<o:p> </o:p>