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Difference between revisions of "BOSC 2008 schedule"

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(New page: ===BOSC 2008 Schedule===)
 
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===BOSC 2008 Schedule===
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You may also download the entire BOSC program with the schedule and all abstracts as a [http://www.open-bio.org/w/images/b/b6/BOSC2008_program.pdf PDF file] (1971KB).
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Return to [[BOSC_2008 | BOSC2008]] main page.
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 +
<div class=Section1>
 +
 
 +
<p class=MsoNormal style='margin-left:.25in;text-indent:-.25in'><b
 +
style='mso-bidi-font-weight:normal'><span style='font-size:16.0pt;font-family:
 +
Arial'>Schedule (Day 1)</span></b></p>
 +
 
 +
<table class=MsoTableGrid border=1 cellspacing=0 cellpadding=0
 +
style='border-collapse:collapse;border:none;mso-border-alt:solid windowtext .5pt;
 +
mso-yfti-tbllook:480;mso-padding-alt:0in 5.4pt 0in 5.4pt;mso-border-insideh:
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.5pt solid windowtext;mso-border-insidev:.5pt solid windowtext'>
 +
<tr style='mso-yfti-irow:0;mso-yfti-firstrow:yes'>
 +
  <td width=638 colspan=3 valign=top style='width:6.65in;border:solid windowtext 1.0pt;
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  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'>Friday, July 18</span></b></p>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'></span></b></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:1'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>9:00-9:15</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Kam Dahlquist (Chair BOSC
 +
  2008)</span></p>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Jason Stajich (President
 +
  OBF)</span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
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  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
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  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[welcome] Open
 +
  Bioinformatics Foundation Update [http://www.slideshare.net/bosc_2008/introduction-bosc2008/ **SLIDES**]</span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:2'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>9:15-10:15</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Julian Lombardi</span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span lang=EN style='font-size:11.0pt;mso-ansi-language:
 +
  EN;mso-bidi-font-weight:bold'>[keynote] Croquet: An Open Collaboration
 +
  Architecture for Scientific Visualization and Simulation</span><span
 +
  style='font-size:11.0pt'></span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:3'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'>10:15-10:45</span></b></p>
 +
  </td>
 +
  <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none;
 +
  border-left:none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'>Coffee Break</span></b></p>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'></span></b></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:4'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>10:45-11:10</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Hervé Ménager </span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[cyberinfrastructure]
 +
  Mobyle: a New Full Web Bioinformatics Framework [http://www.open-bio.org/w/images/c/c7/Menager_Mobyle_abstract.pdf Abstract] [http://www.slideshare.net/bosc_2008/menager-mobyle-bosc2008/ **SLIDES**]</span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:5'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>11:10-11:35</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Richard Smith</span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[cyberinfrastructure]
 +
  Intermine – Open Source Data Warehouse and Query Interface [http://www.open-bio.org/w/images/e/e5/Smith_R_Intermine_abstract.pdf Abstract] [http://www.slideshare.net/bosc_2008/smith-inter-mine-bosc2008/ **SLIDES**]
 +
</span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:6'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>11:35-12:00</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Paul Gordon</span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[cyberinfrastructure] Bridging
 +
  Existing Bioinformatics Tools and Data into Semantic Web Services [http://www.open-bio.org/w/images/6/69/Gordon_SemanticWeb_abstract.pdf Abstract] [http://www.slideshare.net/bosc_2008/gordon-semantic-web-2008/ **SLIDES**]
 +
</span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:7'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>12:00-12:25</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Peter Rice</span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[cyberinfrastructure]
 +
  Soaplab2: More Reliable Sesame Door to Bioinformatics Programs [http://www.open-bio.org/w/images/3/3c/Rice_Soaplab2_abstract.pdf Abstract]</span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:8'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'>12:30-1:30</span></b></p>
 +
  </td>
 +
  <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none;
 +
  border-left:none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'>Lunch</span></b></p>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'></span></b></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:9'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>1:30-1:50</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Barry Sanders &amp; David Arcoleo</span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[cyberinfrastructure]
 +
  BeeSpace:<span style='mso-spacerun:yes'>  </span>An Interactive System for
 +
  Functional Analysis [http://www.open-bio.org/w/images/2/27/Sanders_Arcoleo_BeeSpace_abstract.pdf Abstract][http://www.beespace.uiuc.edu/files/BeeSpaceBOSC2008_v3.ppt **SLIDES** (PPT)]</span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:10'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>1:50-2:10</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Andrew Jenkinson</span></p>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[cyberinfrastructure]
 +
  BioDas Project Update [http://www.open-bio.org/w/images/6/6c/Jenkinson_BioDas_abstract.pdf Abstract]  [http://www.slideshare.net/bosc_2008/andy-jenkinson-bosc-das-2008/ **SLIDES**]
 +
</span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:11'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>2:10-2:30</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Kazuharu Arakawa</span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[visualization] E-Cell 3D: 3-Dimensional
 +
  Visualization of Dynamic Cell Simulation [http://www.open-bio.org/w/images/2/20/Arakawa_E-Cell3D_abstract.pdf Abstract] [http://www.g-language.org/data/gaou/presentation/BOSC08-ECell3D.pdf **SLIDES**]</span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:12'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>2:30-2:50</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Peter Rice</span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[bio*update] EMBOSS:
 +
  European Molecular Biology Open Software Suite [http://www.open-bio.org/w/images/c/ca/Rice_EMBOSS_abstract.pdf Abstract]</span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:13'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>2:50-3:10</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Michael Heuer</span></p>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[bio*update] BioJava
 +
  Project Update [http://www.open-bio.org/w/images/1/10/Heuer_BioJava_abstract.pdf Abstract] [http://www.slideshare.net/bosc_2008/heuer-bio-java-bosc2008/ **SLIDES**]
 +
</span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:14'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>3:10-3:18</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Justin Wilson</span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[lightning talk] Use the
 +
  Make Utility for the Maintenance of Complex Bioinformatics Pipelines [http://www.open-bio.org/w/images/a/a9/Wilson_Make_abstract.pdf Abstract] [http://www.slideshare.net/bosc_2008/wilson-make-bosc2008/ **SLIDES**]
 +
</span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:14'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>3:20-3:28</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Brian O'Connor</span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[lightning talk] SolexaTools: An Open Source Sequence Analysis Framework [http://www.open-bio.org/w/images/6/63/OConnor_SolexaTools_abstract.pdf Abstract] [http://www.slideshare.net/bosc_2008/o-connor-solexa-tools-bosc2008/ **SLIDES**]</span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:16'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'>3:30-4:00</span></b></p>
 +
  </td>
 +
  <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none;
 +
  border-left:none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'>Coffee Break</span></b></p>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'></span></b></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:17;mso-yfti-lastrow:yes'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>4:00-5:30</span></p>
 +
  </td>
 +
  <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none;
 +
  border-left:none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Additional Lightning Talks/Demos/BOFs</span></p>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'></span></p>
 +
  </td>
 +
</tr>
 +
</table>
 +
 
 +
<p class=MsoNormal></p>
 +
 
 +
<span style='font-size:12.0pt;font-family:"Times New Roman";mso-fareast-font-family:
 +
"Times New Roman";mso-ansi-language:EN-US;mso-fareast-language:EN-US;
 +
mso-bidi-language:AR-SA'><br clear=all style='page-break-before:always'>
 +
</span>
 +
 
 +
<p class=MsoNormal style='margin-left:.25in;text-indent:-.25in'><b
 +
style='mso-bidi-font-weight:normal'><span style='font-size:16.0pt;font-family:
 +
Arial'>Schedule (Day 2)</span></b></p>
 +
 
 +
<p class=MsoNormal></p>
 +
 
 +
<table class=MsoTableGrid border=1 cellspacing=0 cellpadding=0
 +
style='border-collapse:collapse;border:none;mso-border-alt:solid windowtext .5pt;
 +
mso-yfti-tbllook:480;mso-padding-alt:0in 5.4pt 0in 5.4pt;mso-border-insideh:
 +
.5pt solid windowtext;mso-border-insidev:.5pt solid windowtext'>
 +
<tr style='mso-yfti-irow:0;mso-yfti-firstrow:yes'>
 +
  <td width=638 colspan=3 valign=top style='width:6.65in;border:solid windowtext 1.0pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'>Saturday, July 19</span></b></p>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'></span></b></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:1'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>9:00-9:05</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Kam Dahlquist</span></p>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Announcements</span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:2'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>9:05-9:30</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Mark Wilkinson</span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[workflows] Interoperability
 +
  with BioMoby – Past, Present, and Future [http://www.open-bio.org/w/images/d/da/Wilkinson_BioMoby_abstract.pdf Abstract]</span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:3'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>9:30-9:55</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Joshua Orvis</span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[workflows] Ergatis: A
 +
  Web-based Bioinformatics Pipeline Management and Collaborative Development
 +
  System [http://www.open-bio.org/w/images/5/59/Orvis_Ergatis_abstract.pdf Abstract]</span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:4'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>9:55-10:15</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Aleksi Kallio</span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[workflows] Chipster – User
 +
  Friendly DNA Microarray Analysis Software [http://www.open-bio.org/w/images/7/7e/Kallio_Chipster_abstract.pdf Abstract] [http://www.slideshare.net/bosc_2008/kallio-chipster-bosc2008/ **SLIDES**]</span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:5'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'>10:15-10:45</span></b></p>
 +
  </td>
 +
  <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none;
 +
  border-left:none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'>Coffee Break</span></b></p>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'></span></b></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:6'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>10:45-11:10</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Jiten Bhagat</span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[workflows] myExperiment:
 +
  Social Software for Sharing Workflows [http://www.open-bio.org/w/images/7/75/Bhagat_myExperiment_abstract.pdf Abstract] [http://www.slideshare.net/bosc_2008/bhagat-myexperiment-bosc2008/ **SLIDES**]</span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:7'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>11:10-11:30</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Todd Smith</span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[workflows] BioHDF: Open Binary
 +
  File Formats for Large Scale Data Management [http://www.open-bio.org/w/images/2/22/Smith_T_BioHDF_Abstract_revised.pdf Abstract] [http://www.slideshare.net/bosc_2008/smith-t-bio-hdf-bosc2008/ **SLIDES**]</span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:8'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>11:30-11:50</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Aaron Kitzmiller</span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[open source software] The
 +
  Open HeliSphere<sup>TM</sup> Project: True Open Source from the Inventors of
 +
  True Single Molecule Sequencing [http://www.open-bio.org/w/images/f/fb/Kitzmiller_OpenHeliSphere_abstract.pdf Abstract] [http://www.slideshare.net/bosc_2008/kitzmiller-openhelisphereproject-bosc2008/ **SLIDES**]</span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:9'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>11:50-12:10</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Ed Lee</span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[open source software]
 +
  Apollo: a Sequence Annotation Editor (with demonstration to follow) [http://www.open-bio.org/w/images/3/3a/Lee_Apollo_abstract.pdf Abstract] [http://www.slideshare.net/bosc_2008/lee-apollo-bosc2008/ **SLIDES**]</span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:10'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'>12:30-1:30</span></b></p>
 +
  </td>
 +
  <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none;
 +
  border-left:none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'>Lunch</span></b></p>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'></span></b></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:11'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>1:30-1:50</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Hilmar Lapp</span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[bio*update] BioSQL
 +
  Reloaded: 1.0 Release, PhyloDB Module, and Future Features [http://www.open-bio.org/w/images/3/3b/Lapp_BioSQL_abstract.pdf Abstract] [http://www.slideshare.net/hlapp/lapp-biosql-bosc2008 **SLIDES**]</span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:12'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>1:50-2:10</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Syed Haider</span></p>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[bio*update] EMBRACE –
 +
  BioMart Developments and Future [http://www.open-bio.org/w/images/1/10/Haider_EMBRACE_abstract.pdf Abstract] [http://www.slideshare.net/bosc_2008/haider-embrace-bosc2008/ **SLIDES**]</span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:13'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>2:10-2:30</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Tiago Antão </span></p>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[bio*update] Biopython
 +
  Project Update 2008 [http://www.open-bio.org/w/images/e/e3/Antao_Biopython_abstract.pdf Abstract] [http://www.slideshare.net/bosc_2008/antao-biopython-bosc2008/ **SLIDES**]
 +
</span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:13'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>2:30-2:38</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Scott Cain</span></p>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[lightning talk] [http://gmod.org/wiki/index.php/Community_Annotation_System GMOD]</span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:13'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>2:38-2:46</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Kannan Vijayan & Dustin Cram</span></p>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[lightning talk] Fiesta</span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:13'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>2:46-2:54</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Ben Faga</span></p>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[lightning talk] CMap: A Comparative Viewer [http://www.slideshare.net/bosc_2008/faga-c-map-bosc2008/ **SLIDES**]
 +
</span></p>
 +
  </td>
 +
</tr>
 +
  <tr style='mso-yfti-irow:13'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>2:54-3:02</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>John Greene</span></p>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[lightning talk] ERIC: Enteropathogen Resource Information Center [http://www.slideshare.net/bosc_2008/greene-bosc2008/ **SLIDES**]</span></p>
 +
  </td>
 +
</tr>
 +
  <tr style='mso-yfti-irow:13'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>3:02-3:10</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Aaron J. Mackey</span></p>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[lightning talk] Off the Beaten Track--Buried Treasure and Hidden Jewels in BioPerl [http://www.slideshare.net/bosc_2008/mackey-bio-perl-bosc2008/ **SLIDES**]</span></p>
 +
  </td>
 +
</tr>
 +
  <tr style='mso-yfti-irow:13'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>3:10-3:18</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Saravanamuttu Gnaneshan</span></p>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[lightning talk] Web Application Developments with Open Bio in Public health Informatics [http://www.slideshare.net/bosc_2008/gnaneshan-public-health-bosc2008/ **SLIDES**]</span></p>
 +
  </td>
 +
</tr>
 +
  <tr style='mso-yfti-irow:13'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>3:18-3:26</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Pjotr Prins (''in absentia'')</span></p>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[lightning talk] BioLib [http://www.slideshare.net/bosc_2008/prins-bio-lib-bosc2008/ **SLIDES**]</span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:13'>
 +
  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
 +
  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
 +
  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>3:26-3:30</span></p>
 +
  </td>
 +
  <td width=136 valign=top style='width:102.0pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Gregg Helt</span></p>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'></span></p>
 +
  </td>
 +
  <td width=407 valign=top style='width:305.4pt;border-top:none;border-left:
 +
  none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
 +
  mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt;
 +
  mso-border-alt:solid windowtext .5pt;padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[lightning talk] Exploratory Analysis with DAS/2 and the Integrated Genome Browser (IGB)</span></p>
 +
  </td>
 +
</tr>
 +
<tr style='mso-yfti-irow:15;height:4.45pt'>
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  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
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  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
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  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'>3:30-4:00</span></b></p>
 +
  </td>
 +
  <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none;
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  border-left:none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
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 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'>Coffee Break</span></b></p>
 +
  <p class=MsoNormal><b style='mso-bidi-font-weight:normal'><span
 +
  style='font-size:11.0pt'></span></b></p>
 +
  </td>
 +
</tr>
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<tr style='mso-yfti-irow:16;mso-yfti-lastrow:yes'>
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  <td width=95 valign=top style='width:71.4pt;border:solid windowtext 1.0pt;
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  border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt;
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  padding:0in 5.4pt 0in 5.4pt'>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>4:00-5:30</span></p>
 +
  </td>
 +
  <td width=543 colspan=2 valign=top style='width:407.4pt;border-top:none;
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  border-left:none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;
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 +
  <p class=MsoNormal><span style='font-size:11.0pt'>Lightning Talks/Demos/BOFs</span></p>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[demo] Ergatis - Joshua Orvis</span></p>
 +
  <p class=MsoNormal><span style='font-size:11.0pt'>[lightning talk] Genographer - Travis Banks [http://www.slideshare.net/bosc_2008/banks-genographer-bosc2008/ **SLIDES**]
 +
</span></p>
 +
<p class=MsoNormal><span style='font-size:11.0pt'>[BOFs] See [[BOSC_2008/Birds-of-a-Feather]]</span></p>
 +
</td>
 +
</tr>
 +
</table>
 +
Return to [[BOSC_2008 | BOSC2008]] main page.

Latest revision as of 14:17, 7 September 2015

You may also download the entire BOSC program with the schedule and all abstracts as a PDF file (1971KB).

Return to BOSC2008 main page.

Schedule (Day 1)

Friday, July 18

9:00-9:15

Kam Dahlquist (Chair BOSC 2008)

Jason Stajich (President OBF)

[welcome] Open Bioinformatics Foundation Update **SLIDES**

9:15-10:15

Julian Lombardi

[keynote] Croquet: An Open Collaboration Architecture for Scientific Visualization and Simulation

10:15-10:45

Coffee Break

10:45-11:10

Hervé Ménager

[cyberinfrastructure] Mobyle: a New Full Web Bioinformatics Framework Abstract **SLIDES**

11:10-11:35

Richard Smith

[cyberinfrastructure] Intermine – Open Source Data Warehouse and Query Interface Abstract **SLIDES**

11:35-12:00

Paul Gordon

[cyberinfrastructure] Bridging Existing Bioinformatics Tools and Data into Semantic Web Services Abstract **SLIDES**

12:00-12:25

Peter Rice

[cyberinfrastructure] Soaplab2: More Reliable Sesame Door to Bioinformatics Programs Abstract

12:30-1:30

Lunch

1:30-1:50

Barry Sanders & David Arcoleo

[cyberinfrastructure] BeeSpace: An Interactive System for Functional Analysis Abstract**SLIDES** (PPT)

1:50-2:10

Andrew Jenkinson

[cyberinfrastructure] BioDas Project Update Abstract **SLIDES**

2:10-2:30

Kazuharu Arakawa

[visualization] E-Cell 3D: 3-Dimensional Visualization of Dynamic Cell Simulation Abstract **SLIDES**

2:30-2:50

Peter Rice

[bio*update] EMBOSS: European Molecular Biology Open Software Suite Abstract

2:50-3:10

Michael Heuer

[bio*update] BioJava Project Update Abstract **SLIDES**

3:10-3:18

Justin Wilson

[lightning talk] Use the Make Utility for the Maintenance of Complex Bioinformatics Pipelines Abstract **SLIDES**

3:20-3:28

Brian O'Connor

[lightning talk] SolexaTools: An Open Source Sequence Analysis Framework Abstract **SLIDES**

3:30-4:00

Coffee Break

4:00-5:30

Additional Lightning Talks/Demos/BOFs


Schedule (Day 2)

Saturday, July 19

9:00-9:05

Kam Dahlquist

Announcements

9:05-9:30

Mark Wilkinson

[workflows] Interoperability with BioMoby – Past, Present, and Future Abstract

9:30-9:55

Joshua Orvis

[workflows] Ergatis: A Web-based Bioinformatics Pipeline Management and Collaborative Development System Abstract

9:55-10:15

Aleksi Kallio

[workflows] Chipster – User Friendly DNA Microarray Analysis Software Abstract **SLIDES**

10:15-10:45

Coffee Break

10:45-11:10

Jiten Bhagat

[workflows] myExperiment: Social Software for Sharing Workflows Abstract **SLIDES**

11:10-11:30

Todd Smith

[workflows] BioHDF: Open Binary File Formats for Large Scale Data Management Abstract **SLIDES**

11:30-11:50

Aaron Kitzmiller

[open source software] The Open HeliSphereTM Project: True Open Source from the Inventors of True Single Molecule Sequencing Abstract **SLIDES**

11:50-12:10

Ed Lee

[open source software] Apollo: a Sequence Annotation Editor (with demonstration to follow) Abstract **SLIDES**

12:30-1:30

Lunch

1:30-1:50

Hilmar Lapp

[bio*update] BioSQL Reloaded: 1.0 Release, PhyloDB Module, and Future Features Abstract **SLIDES**

1:50-2:10

Syed Haider

[bio*update] EMBRACE – BioMart Developments and Future Abstract **SLIDES**

2:10-2:30

Tiago Antão

[bio*update] Biopython Project Update 2008 Abstract **SLIDES**

2:30-2:38

Scott Cain

[lightning talk] GMOD

2:38-2:46

Kannan Vijayan & Dustin Cram

[lightning talk] Fiesta

2:46-2:54

Ben Faga

[lightning talk] CMap: A Comparative Viewer **SLIDES**

2:54-3:02

John Greene

[lightning talk] ERIC: Enteropathogen Resource Information Center **SLIDES**

3:02-3:10

Aaron J. Mackey

[lightning talk] Off the Beaten Track--Buried Treasure and Hidden Jewels in BioPerl **SLIDES**

3:10-3:18

Saravanamuttu Gnaneshan

[lightning talk] Web Application Developments with Open Bio in Public health Informatics **SLIDES**

3:18-3:26

Pjotr Prins (in absentia)

[lightning talk] BioLib **SLIDES**

3:26-3:30

Gregg Helt

[lightning talk] Exploratory Analysis with DAS/2 and the Integrated Genome Browser (IGB)

3:30-4:00

Coffee Break

4:00-5:30

Lightning Talks/Demos/BOFs

[demo] Ergatis - Joshua Orvis

[lightning talk] Genographer - Travis Banks **SLIDES**

[BOFs] See BOSC_2008/Birds-of-a-Feather
Return to BOSC2008 main page.
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